Align Bare OS with Holepunch stack across runtime, P2P, storage, trust, and ops surfaces
Implement the 50-point Holepunch alignment roadmap with a first-pass delivery across coreutils commands, policy examples, audit tooling, and docs. This adds new operator CLIs (appctl/corestorectl/ctxbaredoctor/dhtctl/trustctl), tiered catalog and runtime-compat reports, release-checklist integration, contributor guidance, and kernel/seeder mirrored artifacts for app registry, trust, network services, corestore namespaces, and update manifest workflows.
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